Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PRAD rs35659917 chr16:5003592 G/A 4.55E-5 475 31.35 29.63 27.77 KM Plot
PRAD rs35691464 chr10:131805107 C/T 1.52E-6 482 31.27 29.97 28.8 KM Plot
PRAD rs35697944 chr10:131809488 G/A 4.73E-5 485 31.62 29.8 26.37 KM Plot
PRAD rs35702854 chr5:171531574 C/CG 1.66E-7 493 30.87 32 13.17 KM Plot
PRAD rs35726367 chr2:178802228 C/T 4.13E-5 494 30.77 31.93 20.48 KM Plot
PRAD rs35742188 chr17:62979083 C/T 8.32E-9 490 30.78 31.37 19.63 KM Plot
PRAD rs35758079 chr2:178796407 C/T 4.13E-5 494 30.77 31.93 20.48 KM Plot
PRAD rs35768299 chr7:6774497 T/G 8.63E-5 491 30.97 30.23 32.23 KM Plot
PRAD rs35820158 chr22:22103574 G/GC 6.77E-11 486 31.87 26.3 27.5 KM Plot
PRAD rs35825898 chr7:6728859 A/G 3.14E-7 492 31.23 27.03 50.03 KM Plot
PRAD rs35831095 chr8:143444454 C/T 5.92E-6 488 30.57 31.65 26.52 KM Plot
PRAD rs35832470 chr8:71481658 T/G 6.85E-7 484 31.25 30.73 24.27 KM Plot
PRAD rs35844356 chr11:71558559 G/A 6.03E-5 491 31.27 26.8 20.93 KM Plot
PRAD rs35877814 chr6:168132387 T/C 3.46E-8 481 31.27 28.07 35.58 KM Plot
PRAD rs35885074 chr2:178787340 T/C 4.15E-5 493 30.78 31.93 20.48 KM Plot